Puget Sound Naval Shipyard & Intermediate Maintenance Facility Project ENVVEST

Status, Progress, Reports, and Deliverables
August 13, 2006

Quick Links:
Final Reports
	An analysis of microbial pollution in the Sinclair-Dyes Inlet Watershed (FC TDML Technical Study Final Report)
	Metals Verification Study Final Report
	Railroad Culvert Study
	2006 Community Update Brochure
Current Work Plans
	Storm Event Sampling in the Sinclair and Dyes Inlet Watershed: FY2005 Quality Assurance Project Plan
	Biological Sampling and Analysis in Sinclair and Dyes Inlets, WA FY2005 Quality Assurance Project Plan
	Sediment Organics Verification Study Plan
	Current Meter Sampling Plan
Web Pages
	2005 Storm Event Sampling and Logistics Plan
	Winter 2004 FC Sampling and Logistics Plan
	CSO CH3D-FC Animation Page
	Storm Water Flow and Storm Event Sampling
	Simulation Examples and Data Animation Page
	Data Directory

On The Web:
	Ecology’s Web Site
	WA State Department of Ecology : Water Quality Home : TMDL Home :
		Sinclair/Dyes Inlets Water Quality Improvement Project (TMDL)
	Puget Sound Marine Environmental Modeling (www.psmem.org)
		Integrated Modeling for Sinclair and Dyes Inlets
		Sinclair-Dyes Inlets/Watershed Model – Bob Johnston, SPAWAR (.pdf)
See Also:
	In the News

Contents

1. Status and Progress of Technical Working Groups

2. Community Advisory Committee and Outreach

3. BILIOGRAPHY

1. Status and Progress of Technical Working Groups

1.1. Project Management Team

1.1.1. Meetings

	March 13, 2001
	May 11, 2001
		Defined goals, objectives and “ground rules” for Project; endorsed technical working groups (Regulatory/Ecorisk and Modeling/Watershed).
	July 27, 2001
	Oct 18, 2001
		ENVVEST 1 Year Later
	September 5, 2002
	October 8, 2002
	January 27, 2004
	March 30, 2005

1.2. Technical Steering Committee

1.2.1. Meetings

	April 4, 2000
	May 3, 2001
	May 17, 2001
	June 28, 2001
	October 4, 2001
	April 23, 2002
	September 5, 2002
	February 4, 2003
	April 24, 2003
	December 15, 2003
	September 13, 2004 January 20, 2005 May 26, 2005

1.2.2. Products

		A Watershed-based Ecological Risk Assessment for Sinclair Inlet, Washington (Johnston et al. 2001)
	Technical Work Master Plan (Draft March 2001)
		A Process to Foster Stakeholder Involvement and Participation in Watershed Management: Experiences from the PSNS ENVVEST Project. (April 2001)
	Technical Work Master Plan (Revised Draft October 2001)
	Technical Work Master Plan (Updated Draft April 2002)
		Plan for Community Involvement (Draft September 2001, Navy/EPA/Ecology/Kitsap County)
		Achieving Effective and Efficient Compliance through Watershed-Based Assessment and Partnering: Experiences from the PSNS ENVVEST Project, December 11, 2001
	Technical Work Master Plan (Review Draft), Released May 10, 2002
		Bridging the Gaps Among Industrial Facilities, Regulatory Agencies, and the Public: Leveraging Resources and Building Capacity, May 14, 2002
		Updated Executive Summary for Master Plan (Dec 2003)
		Plan for Public Involvement (word perfect version, MS word version)
	Presentations and Reports
		Improving environmental quality in Sinclair and Dyes Inlets, WA by partnering at the watershed scale (April 2003)
		Improving environmental quality in Sinclair and Dyes Inlets, WA by partnering at the watershed scale. Presented at the Pacific Northwest Regional Water Conference October 29-30, 2003, Stevenson, WA. http://www.swwrc.wsu.edu/conference2003/pdf/Proceedings/Proceedings/Posters/ABSTRACT_Johnston.pdf
		Cooperative Watershed Studies to Develop Water Cleanup Plans for Sinclair and Dyes Inlets, Washington (Johnston et al. 2004a). Pacific Northwest Chapter of the Society of Environmental Toxicology and Chemistry, Annual Meeting, Friday, April 16, 2004
		Cooperative Watershed Studies to Develop Water Cleanup Plans for Sinclair and Dyes Inlets, Washington, paper presented at the Society of Environmental Toxicology and Chemistry Fourth World Congress, Nov. 16, 2004, Portland, OR. (Johnston et al. 2004b)
		A Watershed-based Approach for Developing a Multi-Parameter TMDL In Sinclair- Dyes Inlet, Washington. Invited presentation at the 2005 Puget Sound Georgia Basin Research Conference, Seattle, WA, March 29-31, 2005 (Johnston et al. 2005)
		Improving Environmental Quality in Sinclair and Dyes Inlets, Washington. Presentation at the 2006 annual meeting of the Pacific Northwest Chapter of the Society of Environmental Toxicology and Chemistry, Port Townsend, WA, April 13-15, 2006 (Johnston et al. 2006)

1.3. Technical Working Group

1.3.1. Meetings

	August 20, 2000 (Project Kickoff)
	September 21, 2000
	October 26-27, 2000
	December 7, 2000
	January 30 - February 1, 2001
	May 2001 Watershed Modeling Subworking Group
	May 31, 2001
	Aug 8, 2001
	August 29-30, 2001
	October 29, 2001
	May 14, 2002 - Special Session of the American Water Resources Association
	June 20, 2002 Technical Working Group Meeting at City of Bremerton
	March 4-5, 2003 Workshop at John Wayne Marina
	July 23-24, 2003 TWG Meeting at City of Bremerton
	July 29, 2003 Sediment Working Group, Lacey, WA
	October 23, 2003 Ecology/PSNS Working Group Meeting
	January 20, 2003 Meeting with Ecology Standards Group
	January 26, 2003 TMDL Implementation Working Group
	February 4, 2004 FC TMDL Model Verification Pre-Sampling Meeting
	February 5, 2004 FC TMDL Modeling Working Group Meeting
	February 24, 2004 Sinclair Inlet Fish Distribution Modeling Meeting
	April 12, 2004 Sinclair-Dyes Fecal Coliform (FC) TMDL Implementation Meeting May 20, 2004 Ecology-PSNS Modeling & Critical Conditions – Meeting May 26-27, 2004 Technical Working Group Workshop at John Wayne Marina, Sequim, WA June 14, 2004 Conference Call to Review/Discuss revised landscape analysis and FC loading analysis June 16, 2004 Meeting with EPA Permit Writer (Poulsom, Susan). Review of water quality data for Sinclair Inlet February 11, 2005 Meeting with WDFW and NOAA Fisheries on Biological Sampling February 16, 2005 Puget Sound Marine Environmental Modeling (PSMEM) Meeting, Update on CH3D and POM linkage July 27, 2005 Briefing for the Puget Sound Action Team November 11, 2005 Presentation at AWRA Special Session on Hood Canal December 12, 2005 Technical Working Group Update on FC TMDL Modeling December 14, 2005 PSMEM Update on Current Meter Study and Model Linkage February 15, 2006 PSMEM Status Report

1.3.2. Ecological Studies

Water Quality Monitoring
	ECOS Survey Report (Draft Sep 2000, Final Dec 2004, Katz et al. 2004)
	Dry Dock and Storm Water Outfall Dye Study
		Sinclair Inlet Dye Study: Sampling Plan for Puget Sound Naval Shipyard & Intermediate Maintenance Facility Dry Dock and Storm Water Outfalls (April 2004)
		Final Report
	Toxicity Assessment for Sinclair Inlet
		Sinclair Inlet Toxicity Assessment: Sampling Plan for Puget Sound Naval Shipyard & Intermediate Maintenance Facility Surface Water Copper Bioavailability and Toxicity Study (April 2004)
		Preliminary Report
		Draft Final Report (in prep)
Benthic Flux Study
	Study Plan (April 2000)
	Preliminary Report (February 2001)
		Direct, In-Situ Measurement of Diffusive Metal Fluxes from the Sediments of Sinclair and Dyes Inlet, Washington (2002)
	Mapping Benthic Flux From Measured Data in Sinclair and Dyes Inlets (in prep)
Sediment Mass Balance Study
	Quality Assurance Project Plan (January 2002)
	Sampling Plan (January 2002)
	Health and Safety Plan (January 2002)
		Contaminant Mass Balance for Sinclair and Dyes Inlets, Puget Sound, WA
		Manuscript for Conference Proceedings
		Presentation at Georgia Basin Puget Sound Research Conference, Vancouver, BC, Canada
		Poster at the National Estuaries Conference, April 13-16, 2003, Baltimore, MD
		Presentation at Contaminated Sediment Conference
Biota Studies
	Fish Tissue Sampling and Analysis
	Benthic Macro-Invertebrate Sampling for Streams
	2005 Demersal Fish and Caged Mussel Study

1.3.3. TMDL Studies

TMDL Charge and Direction (incorporated into Master Plan)
Scope for TMDL
	TMDL Scope (Draft August 2002)
	TMDL Scope Report for Sinclair and Dyes Inlet (Draft September 2002)
Fecal Coliform TMDL Study Plan for Sinclair and Dyes Inlets
	Preliminary Draft (May 2002)
	Draft Fecal Coliform TMDL Study Plan (June 16, 2002)
	Revised Draft Fecal Coliform TMDL Study Plan (September 3, 2002)
	TMDL Study Plan for Fecal Coliform in Sinclair and Dyes Inlets
		Fecal Coliform TMDL Study: Sampling and Logistics Plan (Nov 2002 – Jan 2003)
Data from Fecal Coliform TMDL Study
Fecal Coliform TMDL Technical Study
	Draft Report: An Analysis of Microbial Pollution in the Sinclair-Dyes Inlet Watershed
Winter 2004 FC TMDL Model Verification Plan
	Final Sampling Plan
Sediment Verification Studies
Sediment Metals Verification Study
	Technical Approach to address Sediment Metals (Aug 2003)
		Sediment Metals Sampling and Analysis Plan (Aug 2003)
	Final Report (Kohn et al. 2005)
Sediment Organics Verification Study
		Organics Addendum to Sediment Metals Sampling and Analysis Plan
Storm Water Studies
	The ENVVEST Approach for Stormwater Pollutant Loading in the Sinclair- Dyes Inlet Watershed. (Brandenberger et al. 2005) Presentation at the 2005 Puget Sound Georgia Basin Research Conference, Seattle, WA, March 29-31, 2005.
	Raw Data from stormwater sampling

1.3.4. Modeling Studies

A Hydrodynamic Modeling Study Using CH3D for Sinclair Inlet, (Nov 1999)
	Dispersion resulting from aggregating hydrodynamic properties in water quality modeling (Wang 2001)
CH3D Users Manual (Draft July 2001)
Watershed Model Calibration and Verification Plan (July 31, 2001)
Anderson Creek Intercalibration Study (Zip-file Draft May 2002)
Watershed Models (under development)
	HSPF (Clear, Barker, Strawberry, Chico, Gorst, Blackjack, and Anderson)
	MIKE-SHE (Chico Creek partnership with Kitsap County)
	Watershed Water Quantity and Water Quality Modeling for Sinclair and Dyes Inlet
		Develop watershed models for Chico Creek (Partnering with Kitsap County, Danish Hydrologic Institute, and Watershed Council)
	HSPF Unified Model
		Proposed Approach for Developing a Unified HSPF Model for Sinclair and Dyes Inlet Watershed
	Unified HSPF Model Status And Progress (Jan 2002)
Surface Water Models
	Shorterm (days – weeks) CH3D
		CH3D Users Manual
	Longterm (months – years) WASP
		Fate and Transport Modeling for TMDL in Sinclair and Dyes Inlets
		CH3D-WASP: A Linked Hydrodynamic and Water Quality Model

Status of Models

Model	Setup	Calibrated	Verified
HSPF – Unified Model for hydrology	X	X	X
HSPF – Unified Model for hydrology and sediment	In prep
CH3D – tides & currents	X	X	X
CH3D-Eutro – nutrients & DO	X
CH3D-FC – fecal coliform	X	X	X (in prep)
CH3D-Toxi – contaminants	X
CH3D-NOPP (extended grid linked with Puget Sound POM)	X	In prep
WASP-Eutro – nutrients & DO	X	X
WASP-Toxi – contaminants	X
XP-SWMM	X (Partial Sep 2003)

1.3.5. CSO Modeling Subworking Group

	October 2000 (Drogue and Current Meter Study Plan)
	February 2, 2001 (Drogue Study Results)
	September 27, 2001
	October 24, 2001
	March 10-13, 2001 (Dye Release Study)
	May 20, 2002
	January 24, 2003
	March 24, 2003
	Products
		Wang, P.F., R.K. Johnston, H. Halkola, R.E. Richter, and B. Davidson, 2005. A Modeling Study of Combined Sewer Overflows in the Port Washington Narrows and Fecal Coliform Transport in Sinclair and Dyes Inlets, Washington
		CSO Animation page

1.3.6. Watershed Monitoring

Precipitation Monitoring
	KPUD Precip Stations
	City of Bremerton Precip Stations
	Stream Flow – stream gauging stations established
		KPUD Stream Gauging Stations
Ecological Condition – baseline
	Baseline Macro Invertebrate Sampling Results (July 2001)
	Fall 2002 Macro Invertebrate Sampling Sites
	Macro Invertebrate Sampling 2003
Water Quality Monitoring
	Water Quality Monitoring Plan
		Winter Base Flow Sampling Plan
		Winter Base Flow Preliminary Data
		Summer Base Flow Sampling Plan
	In-Stream Storm Event Sampling by The Environmental Company
	Raw Data from Monitoring

1.4. Database/GIS Core Capability

	Functional Specification for Access to Information & Data (June 2000)
	Portal Demonstration and Implementation (on going)
	Metadata about NEDS (Jan 2003)
	GIS Layers (in prep)

2. Community Advisory Committee and Outreach

2.1. Community Advisory Committee

Meetings (formerly the Community Working Group)
	June 15, 2000 Public Meeting, Howard Johnsons, Bremerton, WA
				Public Meeting Presentation; Meeting Summary
	September 12, 2000 Kitsap Regional Library, Bremerton, WA
				Meeting Summary
	December 14, 2000 Givens Center, Port Orchard, WA
				Agenda
	February 22, 2001 Kitsap Regional Library, Bremerton, WA
				Agenda;
	July 31, 2001 McCormick Woods, Port Orchard, WA
				Agenda, Meeting Summary
	May 22, 2002 Kitsap Regional Library, Bremerton, WA
				Agenda Draft Meeting Summary
Community Advisory Committee
	April 27, 2004 Kitsap Regional Library, Bremerton, WA
				Ecology Web Page
	Oct. 26, 2004 Jackson Park Community Center, Bremerton, WA
				Ecology Web Page
	Feb. 24, 2005 Jackson Park Community Center, Bremerton, WA
				Ecology Web Page
	Jun. 24, 2005 Karcher Creek Sewer District, Port Orchard, WA
				Ecology Web Page
		Nov. 3, 2005 Silverdale Community Center, Silverdale, WA
				Ecology Web Page
			Feb. 16, 2006 Karcher Creek Sewer District, Port Orchard, WA
					Ecology Web Page

Other Public Meetings
	September 30, 2003 PSNS & IMF Public Informational Meeting

2.2. Outreach Activities

	April 20, 2001 Society of Environmental Toxicology and Chemistry, Pacific Northwest Chapter Meeting, Coeur D’Alene, Idaho
	Dec 2001 Navy Water Program Managers Meeting, San Diego, CA
	April 18, 2002, Briefing to Suquamish Tribe
	May 14, 2002, Special Session of AWRA Conference, New Orleans, LA
	June 16, 2002 Water Conference Navy Region Northwest Silverdale, WA
		Strategies for TMDL and Water Compliance at Navy Facilities by R.K. Johnston; Environmental Quality Program: Water Technology for Compliance by R. Gauthier
	December 11, 2002 Briefing to Naval Facilities Engineering Command Risk Assessment Working Group
		PSNS Project ENVVEST: Making a Difference at the Watershed Scale
	January 30, 2003 Briefing to Metro King County
		ENVVEST Overview Presentation to MetroKC_.ppt
		Overview of MeteroKC Modeling Studies
		Intro to MetroKC Watershed Modeling
		Ocean Modeling at MetroKC
	March 27, 2003 Briefing to Army Corps of Engineers, Seattle District
		ENVVEST Overview Presentation to Corps
		Overview of Puget Sound Nearshore Program
	April 16, 2003. City of Bainbridge Island Participation in PSNS Project ENVVEST. Presentation on behalf of City of Bainbridge Island Proposal for WRIA Planning Unit
	April 19, 2003. A Watershed-Based Approach For Improving Environmental Quality In Sinclair And Dyes Inlets, WA. Presentation at the Pacific Northwest Chapter Meeting of the Society of Environmental Toxicology and Chemistry Meeting, Port Townsend, WA, April 19, 2003
	September 14-18, 2003, Seattle, WA. Presentation at Estuarine Research Federation (posted on PSMEM web site)
	September 30, 2003, Bremerton, WA. Public Informational Meeting
	October 29-30, 2003, Stevenson, WA. Presentation at Northwest TMDL Water Conference (extended abstract)
	October 29-30, 2003, Stevenson, WA. Poster presented at Northwest TDML Water Conference
	April 16, 2004 Presentation at PNW-SETAC Chapter Meeting, Port Townsend, WA April 23, 2004 Presentation at the Workshop on Modeling the Marine Environment of the Puget Sound, Puget Sound Marine Environmental Modeling, University of Washington, Seattle, WA www.psmem.org June 23, 2004 Meeting with Naval Underwater Warfare Center Division Keyport June 29, 2004 Briefing for City of Bremerton, Public Works Director October 10, 2004 Briefing for City of Bainbridge Island
	A watershed based approach to address environmental issues in Sinclair and Dyes Inlets, WA. Invited seminar at the USEPA National Health and Environmental Effect Research Laboratory, Atlantic Ecology Division, Narragansett, RI

2.3. Miscellaneous

2.3.1. In the News

	NAVY Cleanup will target Sinclair Inlet, Richard Horn, The Sun, June 13, 2000
	SINCLAIR INLET New group to focus on improving water quality, Richard Horn, The Sun, June 19, 2000
	ENVIRONMENT Red marks the spot to watch the water flow, Chris Barron, The Sun, March 13, 2002
	PART 1: ENVISIONING A NEW FUTURE Once upon a Gorst The cities of Bremerton and Port Orchard are jockeying for position, but the county holds the key to the waterfront hamlet's growth. Eric D. Williams, The Sun, January 5, 2003
	PART 2: ENVISIONING A NEW FUTURE GORST emerging: Natural beauty to be uncovered. A remarkable collaboration of local, state and federal officials is about to transform the neglected estuary. Christopher Dunagan, The Sun, Jan 6, 2003
	OUR VIEWS Restoring the gifts of Gorst, Editorial, The Sun, January 8, 2003
	Our Troubled Sound, This special report from the Seattle Post-Intelligencer addresses five different aspects of the problem, from the marked decline of local marine life to current efforts to restore the Sound to health. (Originally published over five days in November 2002)
	RESTORING SEA LIFE IN DYES AND SINCLAIR INLETS Tracking pollution to its source: YOU and ME, Christopher Dunagan, The Sun, April 6, 2003
	RESTORING SEA LIFE IN DYES AND SINCLAIR INLETS
	Longtime Sinclair Inlet cleanup begins to wind down, Chris Dunagan, The Sun, April 6, 2003
	The Navy has Promising Approach to Pollution, Editorial Opinion, The Sun, April 10, 2003
	DYES INLET: Some shellfish given clean bill of health. For the first time since 1969, commercial shellfish growers could be allowed to operate in portions of the inlet. September 20, 2003.
	Estuaries on the edge… Convergence of science and society “Best science regardless of politics,” from There are no sides, T.H. Huxley (1825-1895) By Kathleen Byrne-Barrantes Kitsap Business Journal 10-10-2003
	PORT ORCHARD Sewer plant expansion another sign of growth
	October 23, 2003 Preparing to meet the demands of urban growth, the city of Port Orchard and Karcher Creek Sewer District continue to progress on a multi-million-dollar sewage plant expansion.
	For Immediate Release: October 31, 2003 (03-176)
	OLYMPIA - For the first time in decades, tribal and non-tribal shellfish harvesters will soon be able to take to the beaches of Dyes Inlet to harvest clams and oysters without the threat of digging up contaminated shellfish. The Washington State Department of Health has issued an initial order upgrading portions of northern Dyes Inlet between Silverdale and Bremerton from "prohibited" to "conditionally approved."
	DOH Beach Maps
	LANDMARK DECISION Dyes Inlet shellfish get clean bill of health. November 1, 2003. For the first time in more than 30 years, people will soon be able to eat shellfish from portions of Dyes Inlet without much worry of getting sick. ...<excerpt> The new designation came about because the city of Bremerton has nearly eliminated sewage discharges and the Navy has applied a computer model to show that pollution mostly dissipates before reaching shellfish subject to the new classification.
	PESTS POINT WAY TO CLEAN WATER Streams catch the health bug.
	SINCLAIR AND DYES INLETS More info on cleanup promised April 29, 2004 http://web.kitsapsun.com/redesign/2004-04-29/local/461043.shtml WACKY WEATHER. Rain, hail kiss dry spell goodbye. Some rainfall records are broken and there's no relief in sight. http://web.kitsapsun.com/redesign/2004-05-29/local/20040529484461.shtml SEWAGE SPILL: Health advisory issued at Port Washington Narrows http://web.kitsapsun.com/redesign/2004-05-29/local/20040529484486.shtml GORST CLEANUP EPA grant boosts shoreline. Another $600,000 is slated to address environmental concerns http://web.kitsapsun.com/redesign/2004-06-17/local/20040617004.shtml Editorial OUR VIEWS: Restoring the gifts of Gorst http://web.kitsapsun.com/redesign/2004-06-18/opinion/200406181517.shtml PSNS & IMF Project ENVVEST is Helping Improve Environmental Quality in Sinclair and Dyes Inlets, WA, Marine Environmental Update, Volume FY04, Number 3, Summer 2004 MESO > Newsletters > Table of Contents > PSNS & IMF Project ENVVEST Is Helping Improve Environmental Quality In Sinclair And Dyes Inlets, WA ENVVEST Program Addresses Nonpoint Source Pollution in Watersheds. Battelle Environmental Updates, Spring 2004. Battelle Memorial Institute. http://www.battelle.org/Environment/publications/envupdates/spring2004/article . POPULATION GROWTH Urban-rural split divides officials http://web.kitsapsun.com/redesign/2004-07-07/local/200407073103.shtml Hood Canal Legislation isn't based in science, To the Editor: The Kitsap Sun, Feb 6, 2005. http://www1.kitsapsun.com/bsun/op_letters/article/0,2403,BSUN_19096_3524619,00.html Washington governor declares drought emergency, By David Ammons, The Associated Press, March 11, 2005, The Kitsap Sun http://www1.kitsapsun.com/bsun/local/article/0,2403,BSUN_19088_3612165,00.html ENVEST could aid study of Hood Canal problems, By Bob Benze, Guest Columnist March 26, 2005, The Kitsap Sun http://www1.kitsapsun.com/bsun/op_columnists/article/0,2403,BSUN_19095_3651185,00.html 5 Northwest Commands Win Chief of Naval Operations Environmental Awards. http://www.cpf.navy.mil/environmental/Environmental%20Site%20Site/news/051110n.htm 'Endangered' Listing Gives Leverage for Orcas. November 17, 2005. Kitsap Sun. http://www.kitsapsun.com/bsun/opinion/article/0,2403,BSUN_19097_4244809,00.html Pollution Study Nears Completion. The ultimate goal of the ENVVEST project will be to clean up Sinclair and Dyes inlets. By Christopher Dunagan, February 15, 2006 http://www.kitsapsun.com/bsun/local/article/0,2403,BSUN_19088_4468530,00.html

3. BILIOGRAPHY

A-D

Blakley, N. 2005. Ostrich Bay Sediment Toxicity Evaluation. Washington Department of Ecology, Environmental Assessment, publication number 05-03-023, 75pp.
http://www.ecy.wa.gov/biblio/0503023.html

Brandenberger J. M., C.R. Suslick, R. K. Johnston, 2006a Biological Sampling and Analysis in Sinclair and Dyes Inlets, Washington: Chemical Analyses for 2005 Puget Sound Biota Study. Report PNNL-15834 May 2006. Prepared for the Puget Sound Naval Shipyard and Intermediate Maintenance Facility Project ENVVEST Bremerton, Washington, under Contract DE-AC06-76RLO 1830. Pacific Northwest National Laboratory Richland, Washington, 125pp.

Brandenberger J. M., C.R. Suslick, R. K. Johnston, 2006b. Biological Sampling and Analysis in Sinclair and Dyes Inlets, Washington: Chemical Analyses for the Caged Mussel Study. Report PNNL-15835 May 2006. Prepared for the Puget Sound Naval Shipyard and Intermediate Maintenance Facility Project ENVVEST Bremerton, Washington, under Contract DE-AC06-76RLO 1830. Pacific Northwest National Laboratory Richland, Washington, 122pp.

Brandenberger J. M., C.R. Suslick, R. K. Johnston, 2006c. Data Report: Metal and Conventional Water Chemistry Data for the 2005 Ambient Marine and Model Boundary Events in Support of the Storm Water Studies in Sinclair and Dyes Inlet, Washington. Report PNNL – 15594, Jan. 2006. Prepared for the Puget Sound Naval Shipyard and Intermediate Maintenance Facility Project ENVVEST Bremerton, Washington, under Contract DE-AC06-76RLO 1830. Pacific Northwest National Laboratory Richland, Washington, 100pp.

Brandenberger J. M., C.R. Suslick, R. K. Johnston, 2005a. Data Report: Organic Water Chemistry for 2005 Storm Events in Support of the Storm Water Studies in Sinclair and Dyes Inlet, Washington. Report PNNL-15564, Dec. 2005. Prepared for the Puget Sound Naval Shipyard and Intermediate Maintenance Facility Project ENVVEST Bremerton, Washington, under Contract DE-AC06-76RLO 1830. Pacific Northwest National Laboratory Richland, Washington, 288pp.

Brandenberger J. M., C.R. Suslick, R. K. Johnston, 2005b. Data Report: Metal Contaminants in 2005 Storm Events in Support of the Storm Water Studies in Sinclair and Dyes Inlet, Washington. Report PNNL-15562, Dec. 2005. Prepared for the Puget Sound Naval Shipyard and Intermediate Maintenance Facility Project ENVVEST Bremerton, Washington, under Contract DE-AC06-76RLO 1830. Pacific Northwest National Laboratory Richland, Washington, 239pp.

Brandenberger J. M., C.R. Suslick, R. K. Johnston, 2005c. Data Report: Conventional Water Chemistry for 2005 Storm Events in Support of the Storm Water Studies in Sinclair and Dyes Inlet, Washington. Report PNNL-15563, Dec 2005. Prepared for the Puget Sound Naval Shipyard and Intermediate Maintenance Facility Project ENVVEST Bremerton, Washington, under Contract DE-AC06-76RLO 1830. Pacific Northwest National Laboratory Richland, Washington, 234pp.

Brandenberger, Jill, Chris May, Eric Crecelius, Martin Miller, Robert K. Johnston, and Jerry Sherrell, 2005. The ENVVEST Approach for Stormwater Pollutant Loading in the Sinclair- Dyes Inlet Watershed. Presentation at the 2005 Puget Sound Georgia Basin Research Conference, Seattle, WA, March 29-31, 2005. http://www.engr.washington.edu/epp/psgb/2005psgb/2005proceedings/Papers/B2_BRAND.pdf

Brandenberger, J.M. R. K. Johnston, E. A. Crecelius, J. Sherrell, and R. Pingree, 2005. Storm Water Loading in the Sediment Mass Balance for Sinclair and Dyes Inlets, Puget Sound, Washington Integrating Sediment Cleanup and Watershed Management for Sinclair and Dyes Inlets, WA USA. Third International Conference on Remediation of Contaminated Sediments, January 24-27, 2005. New Orleans, LA. http://www.battelle.org/sedimentscon

Brown, J. 2001 (ed). User's Guide For A Three-Dimensional Numerical Hydrodynamic, Salinity, and Temperature Model Of Sinclair Inlet. July 2001. Concurrent Technologies Corporation, Contract No: GS-10T-EBD-005, Task Order ID: ABH-170-037, Bremerton, WA

Choi, Woo-Hee, P.F. Wang, B.E. Skahill, R.K. Johnston, and Robert Ambrose, 2002.CH3D-WASP-A Linked Hydrodynamic and Water Quality Model. Paper presented at American Water Resources Association (AWRA) 2002 Spring Specialty Conference, Coastal Water Resources, New Orleans, Louisiana, May 13-15, 2002.

Chadwick D. B., H. Samaitis, B. Davidson, J. Guerrero, T. Hampton, E. Crecelius, P.F. Wang, and R.K. Johnston, 2002. Direct, In-Situ Measurement of Diffusive Metal Fluxes from the Sediments of Sinclair and Dyes Inlet, Washington. The Association for Environmental Health and Sciences (AEHS) 12th Annual West Coast Conference on Contaminated Soils, Sediments and Water March 18-21, 2002 Marriott Mission Valley, San Diego, California.

Concurrent Technologies Corporation 2001a. RPI Portal Functional Specification. June 22, 2001. Contract No. GS-10T-99-EBD-0005, Task Order ID: 170-037 RPI-PSNS 00, Bremerton, WA 98312

Concurrent Technologies Corporation 2001c. Benthic Macroinvertebrate Sampling Field Activity And Data Summary Report, July 31, 2001. Contract No: GS-10T-EBD-005, Task Order ID: ABH-170-037, Bremerton, WA

Concurrent Technologies Corporation 2001. Watershed Assessment Plan. August 16, 2001, Contract No. GS-10T-EBD-0005 Task Order ID: ABH 170-037, Bremerton, WA 98312

Crecelius, Eric, Robert K. Johnston, Martin Miller, Jill Brandenberger, Jim Leather and Joel Guerrero, 2003. Contaminant Mass Balance for Sinclair and Dyes Inlets, Puget Sound, WA. Presentation at Georgia Basin Puget Sound Research Conference, Vancouver, BC, Canada April 2, 2003

Determan, Tim, 2001. Status and Trends in Fecal Coliform Pollution in Puget Sound Year 2000. A Report for the Puget Sound Ambient Monitoring Program. Washington State Department of Health Office of Food Safety and Shellfish Programs August, 2001.

Determan, Tim, 2003. Atlas of Fecal Coliform Pollution in Puget Sound: Year 2001 A Report for the Puget Sound Ambient Monitoring Program Washington State Department of Health Office of Food Safety and Shellfish Programs January 2003.

Dunagan, C., 2003. LANDMARK DECISION Dyes Inlet shellfish get clean bill of health. The Sun.

Davidson et al.2001. Sediment Flux Assessment in Sinclair and Dyes Inlet. Presentation at the 2001 Puget Sound Research Conference, February 12 to 14, 2001, Bellevue, Washington.

Diefenderfer, N.P. Kohn, E.A. Crecelius, R.K Johnston, G.M. Sherrell 2003. Final Draft: Technical Approach to Address Section 303(d) Listings for Metals in Sinclair and Dyes Inlets. PSNS Project ENVVEST.

E-J

ENVVEST 2002a. Dye Release Study in Port Washington Narrows, Draft Sampling Plan. Prepared by PSNS ENVVEST CSO Modeling Subworking Group, Final Draft February 4, 2002.

ENVVEST 2002. PSNS Project ENVVEST Technical Work Masterplan, of May 2002, prepared by PSNS Project ENVVEST Technical Steering Committee.

ENVVEST Technical Steering Committee. 2002. 303d Scoping Summary for Sinclair and Dyes Inlets and Watershed. Puget Sound Naval Shipyard Project ENVVEST, Bremerton, Washington. September 20, 2002.

ENVVEST Regulatory Working Group 2002. FINAL DRAFT Fecal Coliform Total Maximum Daily Load Study Plan For Sinclair and Dyes Inlets Quality Assurance Project Plan. October 4, 2002. http://www.ecy.wa.gov/programs/wq/sinclair-dyes_inlets/fc_tmdl_studyplan_final_draft_print.pdf

ENVVEST Project Management Team, 2003. Puget Sound Naval Shipyard Project ENVVEST Executive Overview.

ERDC Vicksburg (ed), 2002. ENVVEST Watershed Modeling Support: HSPF Inter-Calibration Study for the Anderson Creek Watershed, Draft. May 7, 2002 Prepared by: US Army Engineer Research and Development Center (ERDC Vicksburg), SPAWAR SYSTEMS Center – San Diego (SSC SD), concurrent technologies corporation (CTC).

Johnson, B.E., Z. Zhang, B.E. Skahill, H. Samaitis, J.D. Jorgeson, and P.N. Deliman, 2001. Hydrologic Simulation Program - FORTRAN (HSPF) Development, Calibration, and Verification Plan for the Sinclair/Dyes Inlet Watershed. July 31, 2001, Prepared For: Puget Sound Naval Shipyard Project ENVVEST.

Johnson, B.E. Brian E. Skahill, Zhonglong Zhang, and Heather Samaitis, 2002. Watershed Water Quantity and Water Quality Modeling for Sinclair and Dyes Inlet. Paper presented at American Water Resources Association (AWRA) 2002 Spring Specialty Conference, Coastal Water Resources, New Orleans, Louisiana, May 13-15, 2002.

Johnson, Billy E., Brian E. Skahill, Patrick N. Deliman, and Jeffrey D. Jorgeson, 2002. ENVVEST Hydrologic Study – Blackjack Creek Watershed and Gorst Creek Watershed. FINAL REPORT Environmental Laboratory Coastal and Hydraulics Laboratory FINAL REPORT September 2002

Johnston, R.K., M.L. Rideout, C.W. May, and G.M. Sherrell 2001. A Watershed-based Ecological Risk Assessment for Sinclair Inlet, Washington. Proceedings of the 2001 Puget Sound Research Conference, February 12 to 14, 2001, Bellevue, Washington.

Johnston, Robert K., Steve Swanson, Jerry Sherrell, Brad Davidson, P.F. Wang, Frank Meriwether, Paul Williams, Mindy Fohn, Stan Olsen, Chris Collins, and Marion Rideout 2001. A Process to Foster Stakeholder Involvement and Participation in Watershed Management: Experiences from the PSNS ENVVEST Project. Presented at Society of Environmental Toxicology and Chemistry, Pacific Northwest Chapter Meeting, Coeur D’Alene, Idaho, April 20, 2001.

Johnston, Robert K., Gerald M Sherrell, Will Kendra, Dave Garland, Sally Lawrence, Michael Rylko, Martha Turvey, Christopher W. May, Kenneth E. Richter, Thomas Ostrom, and Michael Mecham, 2003. Improving environmental quality in Sinclair and Dyes inlets, WA by partnering at the watershed scale. Presentation at the Pacific Northwest Chapter Meeting of the Society of Environmental Toxicology and Chemistry, Port Townsend, WA.

Johnston, R.K., C.W. May, V.S. Whitney, J.M. Wright, and B. Beckwith 2004. Fecal Coliform Model Verification Sampling Plan Winter 2004. Addendum to the Fecal Coliform Total Maximum Daily Load Study Plan For Sinclair and Dyes Inlets. Prepared by Puget Sound Naval Shipyard & Intermediate Maintenance Facility Project ENVVEST For Washington State Department of Ecology Assessments Sections. February 19, 2004.

Johnston, R.K. and P.F. Wang 2004. A Partnership for Modeling the Marine Environment of Puget Sound, Washington – Puget Sound Naval Shipyard/Space and Naval Warfare Systems Center Report. FY2005 Progress Report. National Ocean Partnership Program, Office of Naval Research.

Johnstson, R.K. 2005. “A watershed based approach to address environmental issues in Sinclair and Dyes Inlets, WA.” Invited seminar at the USEPA National Health and Environmental Effect Research Laboratory, Atlantic Ecology Division, Narragansett, RI entitled. The seminar was hosted by Dr. Marylin ten Brink, Chief, Watershed Diagnostics Branch.

Johnston, R.K. and Skip Albertson, 2005. Current Meter Study for Agate, Port Orchard, and Rich Passages Study Plan. Puget Sound Marine Environmental Modeling and Project ENVVEST

Johnston, R.K. and P.F. Wang 2005. A Partnership for Modeling the Marine Environment of Puget Sound, Washington – Puget Sound Naval Shipyard/Space and Naval Warfare Systems Center Report. FY2005 Progress Report. National Ocean Partnership Program, Office of Naval Research.

Johnston, R.K., J. Brandenberger, E. Crecelius, S. Steinert, M. Salazar, and S. Salazar, 2005. Biological Sampling and Analysis in Sinclair and Dyes Inlets, WA FY2005 Quality Assurance Project Plan. Puget Sound Naval Shipyard & Intermediate Maintenance Facility Project ENVVEST, Mar. 31, 2005, 52pp.

Johnston, R.K., J. Brandenberger, C.W. May, V.S. Whitney, J.M. Wright, B. Beckwith, and R. Pingree 2005. Storm Event Sampling in the Sinclair and Dyes Inlet Watershed: FY2005 Quality Assurance Project Plan. Prepared by Puget Sound Naval Shipyard & Intermediate Maintenance Facility Project ENVVEST For Washington State Department of Ecology Assessments Sections. Jan 18, 2005.

Johnston, RK, Sherrell, GM, Leisle, DE, Lawrence, S, Roberts, M., May, CM, Keiss, J and Ostrom, T, 2006. Improving Environmental Quality in Sinclair and Dyes Inlets, Washington. Presentation at the 2006 annual meeting of the Pacific Northwest Chapter of the Society of Environmental Toxicology and Chemistry, Port Townsend, WA, April 13-15, 2006.

K-M

Katz C.N., et al. 1999. Sinclair Inlet Water Quality Assessment. Puget Sound Wastewater Technology and Evaluation Research Project, Space and Naval Warfare Systems Center, San Diego, Ca. September 30, 1999.

Katz C.N, P.L. Noble, D.B. Chadwick, B. Davidson, and R.D. Gauthier. 2004. Sinclair Inlet Water Quality Assessment: Water Quality Surveys Conducted September 1997, March 1998, and July 1998. Prepared for Puget Sound Naval Shipyard Project ENVVEST. Space and Naval Warfare Systems Center, San Diego, CA, January 2004.

Katz, C.N., B. Davidson, R.K. Johnston, and B. Beckwith, 2004. Sinclair Inlet Dye Study: Sampling Plan for Puget Sound Naval Shipyard & Intermediate Maintenance Facility Dry Dock and Storm Water Outfalls (April 2004). Space and Naval Warfare Systems Center, San Diego, CA.

Katz, C.N. and A. Blake 2004. Puget Sound Naval Shipyard & Intermediate Maintenance Facility Dry Dock Discharge Dye Study. Space and Naval Warfare Systems Center, San Diego, CA.

Kawase, Mitsuhiro, A. Devol, M. Logsdon, M. Warner, W. Winn, R.K. Johnston, P.F. Wang, F.R. Stahr, J. Newton, S. Albertson, R. Shuman, and B. Nairn 2005. A Partnership for Modeling the Marine Environment of Puget Sound, Washington.

Kitsap County Health District (KCHD) 2003. Water Quality Program 2001-2002 WATER QUALITY MONITORING REPORT. Introduction, Dyes Inlet Watershed, Sinclair Inlet Watershed.

KCHD 2002. Water Quality Program 2000-2001 WATER QUALITY MONITORING REPORT.

Kohn, N.P, M.C. Miller H. L. Diefenderfer, R.K. Johnston, G.M. Sherrell, and B. Beckwith. 2003. Sampling and Analysis Plan Sediment Metals Verification Study for Sinclair and Dyes Inlet, Washington. Prepared by PNNL Marine Sciences Laboratory for PSNS & IMF Project ENVVEST, August 2003.

Kohn, N.P, M.C. Miller H. L., Brandenberger, and Johnston, R.K. 2005. Metals Verification Study for Sinclair and Dyes Inlets, Washington” prepared by BSML and SSC-SD in support of PSNS&IMF Project ENVVEST

Kohn, N.P., M.C. Miller, R.K. Johnston, J. Leather, J. Guerrero, G.M. Sherrell, B. Beckwith 2005. Addendum to Sampling and Analysis Plan To Include Organics Verification Study Sediment Metals Verification Study for Sinclair and Dyes Inlet, Washington. Project ENVVEST January 18, 2005

Leisile, D.E., G.M. Sherrell, R.K. Johnston, P.F. Wang, D. Ginn, C. Berthiaume, E. Crecelius, J. Brandenberger, N. Kohn, P. McLaren, and B.E. Skahill 2005. Integrating Sediment Cleanup and Watershed Management for Sinclair and Dyes Inlets, WA USA. Third International Conference on Remediation of Contaminated Sediments, January 24-27, 2005. New Orleans, LA. http://www.battelle.org/sedimentscon handout of presentation

May, C.W., et al., 2003. An Analysis of Microbial Pollution in the Sinclair-Dyes Inlet Watershed, Draft Report. Prepared by Battelle Marine Sciences Laboratory for PSNS & IMF Project ENVVEST, Aug 6, 2003.

May, C.W. and G. Peterson. 2003. Kitsap Salmonid Refugia Report. Kitsap County, Port Orchard, WA.

May, C.W., Gerald Sherrell, Robert K. Johnston, Frank Meriwether, Tim Determan, Will Kendra, Stuart Magoon, Stuart Whitford, and James Zimney, 2003. Assessment of Bacterial Contamination in the Sinclair-Dyes Inlet Watershed: The Initial Phase of a Watershed-based TMDL Implementation Program, presentend at the Pacific Northwest Regional Water Conference October 29-30, 2003, Stevenson, WA. Abstract, Presentation

May C.W., M.C. Miller, and J.A. Southard, 2004. An Analysis of Stream Culvert Fish Passage on the Navy Railroad Line between Bremerton and Shelton, Washington, Battelle Marine Sciences Laboratory, Sequim, Washington, December 2004.

May, C.W. Dana Woodruff, Valerie Cullinan, Nathan Evans, Lohna O’Rourke, Lee Miller, Robert K. Johnston, P.F. Wang, Heather Halkola, K.E. Richter, B. Davidson, Victoria Whitney, and Joseph Wright, 2005. An analysis of microbial pollution in the Sinclair-Dyes Inlet Watershed. Washington Department of Ecology, Report No. 05-03-042, 428pp + Appendices. http://www.ecy.wa.gov/biblio/0503042.html

McLaren, Patrick, 2004. The Sediments of Dyes and Sinclair Inlets: An Assessment Of Change Between 1997-8 and 2003.Puget Sound Naval Shipyard & Intermediate Maintenance Facility (PSNS) Project Environment Investment (ENVVEST) Purchase Order Number: N6600104MJ071, GeoSea® Consulting (Canada) Ltd. 789 Saunders Lane Brentwood Bay, BC, V8M 1C5 Canada.

May, C.W., Robert K. Johnston, Sally Lawrence 2005. A Watershed-based Approach for Developing a Multi-Parameter TMDL In Sinclair- Dyes Inlet, Washington. Invited presentation at the 2005 Puget Sound Georgia Basin Research Conference, Seattle, WA, March 29-31, 2005.

Miller, Martin, Eric Crecelius, and Deborah Coffey 2002. Development of a Contaminant Mass Balance for Sediment in Sinclair and Dyes Inlets, Washington, Quality Assurance Project Plan, Field Sampling Plan, Health and Safety Plan, Final. Battelle Pacific Northwest National Laboratory, Sequim, Washington. January 2002.

Miller, Martin C. Robert K. Johnston, Eric Crecelius, Jill Brandenberger, Jim Leather, and Joel Guerrero 2003. Contaminant Mass Balance for Sinclair and Dyes Inlets, Puget Sound Washington. Abstract and Poster at the National Estuaries Conference, April 13-16, 2003, Baltimore, MD.

MIKE-SHE / MIKE-11 and HSPF Model Comparison Study, 2001. Prepared by Watershed Modeling Subworking Group of the PSNS Project ENVVEST Space and Naval Warfare Systems Center, Concurrent Technologies Corporation, Kitsap County Natural Resources, Puget Sound Naval Shipyard, and Danish Hydraulics Institute, May 15, 2001.

N-T

Richter, K.E. 2004. CH3D Hydrodynamic Model Validation Report. Space and Naval Warfare Systems Center, San Diego, CA. September 12, 2004

Roberts, M. and G. Pellitier 2001. Estimating Loads from 71 Watersheds to South Puget Sound, Puget Sound Research 2001. Proceedings of the 2001 Puget Sound Research Conference, February 12 to 14, 2001, Bellevue, Washington.

Rosen, G., I. Rivera-Duarte, and R.K. Johnston, 2004. Sinclair Inlet Toxicity Assessment: Sampling Plan for Puget Sound Naval Shipyard & Intermediate Maintenance Facility Surface Water Copper Bioavailability and Toxicity Study. FINAL DRAFT, 6 APRIL 2004. Space and Naval Warfare Systems Center, San Diego, CA.

Rosen, G., I. Rivera-Duarte, and R.K. Johnston, 2004b. Sinclair Inlet Toxicity Assessment : Puget Sound Naval Shipyard & Intermediate Maintenance Facility Surface Water Copper Bioavailability and Toxicity Study, Draft Interim Report, September 2004, Space and Naval Warfare Systems Center, San Diego, CA.

Salazar, MH, Salazar, SM, Johnston, RK, Davidson, BM, Steinert, SA, CSC, San Diego, CA; and Brandenberger JM., 2006. Using Caged Mussels To Characterize Exposure And Effects Over Small Spatial Scales in Sinclair & Dyes Inlet, Washington. Presentation at the 2006 annual meeting of the Pacific Northwest Chapter of the Society of Environmental Toxicology and Chemistry, Port Townsend, WA, April 13-15, 2006.

Samaitis, Heather, Brian Skahill and P.F. Wang 2000. Data Review For Sinclair Inlet Project, Space and Naval Warfare Systems Center, San Diego, CA, September 1, 2000.

Sherrell, Gerald M., Robert K. Johnston, Thomas Eaton, Martha Turvey, Michael Rylko, Kevin Fitzpatrick, Dave Garland, Will Kendra, Darla Montgomery, Keith Folkerts, Sara Simrell, Marion Rideout, Ken Richter, and Field Ryan, 2002. Bridging the Gaps Among Industrial Facilities, Regulatory Agencies, and the Public: Leveraging Resources and Building Capacity Paper presented at American Water Resources Association (AWRA) 2002 Spring Specialty Conference, Coastal Water Resources, New Orleans, Louisiana, May 13-15, 2002.

Sherrell, Gerald M., Robert Cipra, Steven Swanson, Thomas Eaton, Kevin Fitzpatrick, Darla Montgomery, Marion Rideout, and Robert K. Johnston 2001. Achieving Effective and Efficient Compliance through Watershed-Based Assessment and Partnering: Experiences from the PSNS ENVVEST Project US Navy/Marine Corps. Water Program Managers Meeting, December 11-13, 2001, San Diego, Ca.

Skahill, Brian E., Zhonglong Zhang, P.F. Wang, and Woo-Hee Choi, 2002. GIS-Based Approaches for Estimating Mean Annual Surface Runoff. Paper presented at American Water Resources Association (AWRA) 2002 Spring Specialty Conference, Coastal Water Resources, New Orleans, Louisiana, May 13-15, 2002.

Skahill, B.E., and H. Halkola 2002. Proposed Approach for Developing a Unified HSPF Model for Sinclair and Dyes Inlet Watershed.

Skahill, Brian E. and Heather Halkola 2003. Proposed Approach For The Development of a Single HSPF Model (For The Land Area Draining Into Sinclair And Dyes Inlets) For PSNS Project ENVVEST. Prepared by US Army Engineer Research and Development Center Vicksburg, MS and Space and Naval Warfare Systems Center, Environmental Sciences Division, San Diego, CA 13 SEP 2002.

Skahill, Brian E. 2003. Unified HSPF model status and progress. US Army Engineer Research and Development Center Vicksburg, MS Thursday, January 23, 2003

Skahill, Brian E. 2003. Preliminary Hydrological Simulation Program – Fortran (HSPF) Model Hydrologic Calibration for Streams in the Sinclair–Dyes Inlet Watershed US Army Engineer Research and Development Center Vicksburg, MS, September 2003.

Skahill, Brian E. 2004. Hydrological Simulation Program – Fortran (HSPF) Model Hydrologic Calibration for Streams in the Sinclair–Dyes Inlet Watershed, Draft Report. US Army Engineer Research and Development Center Vicksburg, MS, April 2004.

Skahill, Brian E. 2005. Addendum: HSPF Calibration - Missing Streams and Preliminary Storm Water Evaluation. Addendum to Hydrological Simulation Program – Fortran (HSPF) Model Hydrologic Calibration for Streams in the Sinclair–Dyes Inlet Watershed US Army Engineer Research and Development Center Vicksburg, MS.

Skahill Brian E and John Doherty 2005. Regularization as a Methodology for Watershed Model Calibration: Case Study Applications to Chico Creek in Kitsap County, WA, USA. Presentation at the annual meeting of the American Water Resources Association Meeting in Seattle, WA.

Skahill Brian and Robert K. Johnston 2005. “Technical Studies in the Sinclair and Dyes Inlet Watershed.” Invited presentation at special session on restoring Hood Canal at the annual meeting of the American Water Resources Association Meeting in Seattle, WA. Presentation

Skahill Brian E. and John Doherty Efficient accommodation of local minima in watershed model calibration. ARTICLE Journal of Hydrology, In Press, Corrected Proof, Available online 20 March 2006,

SSC and BMSL 2000. Puget Sound Benthic Flux Sampling Plan. April 14, 2000. Prepared by Space and Naval Warfare Systems Center, Environmental Sciences Division, San Diego, CA and Battelle Marine Sciences Laboratory, Sequim, WA.

(TEC) The Environmental Company 2002a. Final Quality Assurance Project Plan for In-Stream Storm Flow Sampling PSNS Project ENVVEST Study Area Bremerton, Washington October 2002. Prepared For: Naval Facilities Engineering Command Engineering Field Activity, Northwest and Puget Sound Naval Shipyard Prepared By: The Environmental Company, Inc. Bellevue, WA Contract No.: N44255-98-D-4416, Contract Task Order: 0050

TEC 2002b. Final Sampling and Analysis Plan for In-Stream Storm Flow Sampling PSNS Project ENVVEST Study Area Bremerton, Washington. October 2002. Prepared For: Naval Facilities Engineering Command Engineering Field Activity, Northwest and Puget Sound Naval Shipyard Prepared By: The Environmental Company, Inc. Bellevue, WA Contract No.: N44255-98-D-4416, Contract Task Order: 0050

TEC 2002c. Final Health and Safety Plan for In-Stream Storm Flow Sampling PSNS Project ENVVEST Study Area Bremerton, Washington. October 2002. Prepared For: Naval Facilities Engineering Command Engineering Field Activity, Northwest and Puget Sound Naval Shipyard Prepared By: The Environmental Company, Inc. Bellevue, WA Contract No.: N44255-98-D-4416, Contract Task Order: 0050

TEC 2003a. Annual Report 2002-2003 In-Stream Storm Flow Sampling Puget Sound Naval Shipyard (PSNS) Project Environmental Investment (ENVVEST), July 2003. Prepared For: Naval Facilities Engineering Command Engineering Field Activity, Northwest and Puget Sound Naval Shipyard Prepared By: The Environmental Company, Inc. Bellevue, WA Contract No.: N44255-98-D-4416 Contract Task Order: 0060.

TEC 2003b. Draft Sampling and Analysis Plan for Sampling and Analysis of In-Stream and Storm Water Chemical and Flow Characteristics PSNS Project ENVVEST Study Area Bremerton, Washington ENVIRONMENTAL SERVICES MONITORING Long-Term Monitoring 19 September 2003. Prepared For: Naval Facilities Engineering Command Engineering Field Activity, Northwest and Puget Sound Naval Shipyard Prepared By: The Environmental Company, Inc. Bellevue, WA Contract No.: N44255-98-D-4416 Contract Task Order: 0068

TEC 2003d. Annual Report 2002-2003 In-Stream Storm Flow Sampling Puget Sound Naval Shipyard (PSNS) Project Environmental Investment (ENVVEST), July 2003.

TEC 2004. Storm Event Sampling for 2004. Work Plans, Field Sampling Reports, and Raw Data.

TEC 2005. Storm Event Sampling for 2005. Work Plans, Field Sampling Reports, and Raw Data.

U-Z

US Navy, US EPA, and Washington State Department of Ecology 2000. Project ENVVEST: Phase I Final Project Agreement for the Puget Sound Naval Shipyard, September 25, 2000 [Federal Register: October 23, 2000 (Volume 65, Number 205)].

US Navy, US EPA, and Washington State Department of Ecology 2002. FINAL DRAFT Fecal Coliform Total Maximum Daily Load Study Plan For Sinclair and Dyes Inlets. Draft Quality Assurance Project Plan Prepared by PSNS Project ENVVEST Regulatory Working Group For Washington State Department of Ecology Watershed Assessments Sections October 4, 2002.

Vandervoort, D. 2001. Land Use Runoff Contributions to Marine Water Bodies, Sinclair Inlet and Dyes Inlet, Kitsap County, Washington. ESRI Online Map Book Volume 16, Geography Creating Communities

Vandervoort, D. 2001. GIS analysis for watershed assessment. Presentation for the PSNS ENVVEST Modeling Technical Working Group Meeting, Aug 29-30, 2001, Naval Subase Bangor, Wa.

Wang, P.F and K.E. Richter 1999. A Hydrodynamic Modeling Study Using CH3D for Sinclair Inlet, Draft Report Space and Naval Warfare Systems Center, San Diego, CA, November 3, 1999.

Wang, P.F. 2001. Dispersion resulting from aggregating hydrodynamic properties in water quality modeling. International Journal of Engineering Science, 39:95-112.

Wang, P.F, Robert K. Johnston, Heather Samaitis, and Brian Skahill 2001. Developing Urban Watershed Runoff Models for Navy Harbors and Facilities. Science & Technologies Capabilities Initiative Proposal to the Office of Naval Research

Wang, P.F., Bob Johnston, Brad Davidson, Bart Chadwick, Woo-Hee, Choi, Steve Swanson, Frank Meriweather, Paul Williams, Mindy Fohn, Stan Olsen, and Chris Collins 2001. Lagrangian Drifts in the Tide and Wind-Driven Dyes Inlet, WA, Proceedings of the ASCE Mechanics of Engineering conference (San Diego), June 27, 2001.

Wang, P.F., Brian Skahill, Heather Samaitis, and Robert Johnston 2002. GIS-Based Artificial Neural Network and Processed-Based HSPF Model for Watershed Runoff in Sinclair and Dyes Inlet, WA. Proceedings of Watershed 2002 Conference.

Wang, P.F., Woo-Hee Choi, Ken Richter, Brad Davidson, Bart Chadwick, R.K. Johnston, Steve Swanson, Frank Meriwether, Paul Williams, and Robert Ambrose, 2002. Fate and Transport Modeling for TMDL in Sinclair and Dyes Inlets. Paper presented American Water Resources Association (AWRA) 2002 Spring Specialty Conference, Coastal Water Resources, New Orleans, Louisiana, May 13-15, 2002.

Wang, P.F., R.K. Johnston, H. Halkola, R.E. Richter, and B. Davidson, 2005. A Modeling Study of Combined Sewer Overflows in the Port Washington Narrows and Fecal Coliform Transport in Sinclair and Dyes Inlets, Washington. Prepared by Space and Naval Warfare Systems Center, San Diego for Puget Sound Naval Shipyard & Intermediate Maintenance Facility Project ENVVEST, Final Report, June 22, 2005, 26pp. http://www.ecy.wa.gov/biblio/0503042appf.html (Link to CSO Animations Page)

WDOH 2003. Shellfish harvesting opens in Northern Dyes Inlet, News Release Oct. 31, 2003.

WDOH et al. 2000. Drogue Study for Dyes Inlet Sampling Plan. September 20, 2000. Prepared by: Washington Department of Health, Shellfish Protection Division, Space and Naval Warfare Systems Center, Environmental Sciences Division, Puget Sound Naval Shipyard, Suquamish Tribe, City of Bremerton, and Concurrent Technologies Corporation.

Final Reports

Current Work Plans

Web Pages

1. Status and Progress of Technical Working Groups

1.2. Technical Steering Committee

1.3. Technical Working Group

1.3.3. TMDL Studies

1.3.4. Modeling Studies

Status of Models

1.3.5. CSO Modeling Subworking Group

1.4. Database/GIS Core Capability

2.3.1. In the News

3. BILIOGRAPHY